PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001261.1_g010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 248aa MW: 27966.8 Da PI: 6.2326 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 88.4 | 6e-28 | 168 | 225 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 ldDgy+WrKYG+K +k +++pr+Y++Ct++gC+vkk+ver+++d ++++ tY g Hnh Cse_sc001261.1_g010.1 168 LDDGYRWRKYGKKAIKCTPNPRNYFKCTTNGCKVKKRVERDRDDSSYIIATYIGLHNH 225 59******************************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
METCLNLSKL AQKSTMDAFL PLSDQDQTGN PNFSSSSFNC PSITNDDRVY DHTNVDNTLY 60 YNHNLTDDNS NPNTLSLIDH QDSSSSNSLS YLNTNEQTPD HLLEITTDVN ISKSPQISAD 120 AASMTQLTWI ERQLFSFLLA KCSDNSNQKR LNDDTKIGFR IQTALEVLDD GYRWRKYGKK 180 AIKCTPNPRN YFKCTTNGCK VKKRVERDRD DSSYIIATYI GLHNHGVPST TASFSNTCPT 240 GVWTLQYS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26170.1 | 3e-32 | WRKY family protein |