PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001164.1_g040.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SRS
Protein Properties Length: 397aa    MW: 43334.4 Da    PI: 7.6734
Description SRS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001164.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF702221.71.5e-681533243154
                 DUF702   3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa....................aea 70 
                             g+++CqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpaakrrerqqqla++++++++ +                     ++
  Cse_sc001164.1_g040.1 153 GGGMNCQDCGNQAKKDCQHMRCRTCCKSRGFQCHTHVKSTWVPAAKRRERQQQLATLTNQHQQPSlgnqqlslmmsrgggasgsgIDQ 240
                            5789****************************************************99888777688999*********999777667 PP

                 DUF702  71 askrkrelkskkqsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154
                            ++kr re+++  +++    +l+++++++ le+ ++P+evss+avfrcvrv+++d++ee+laYqtavsigGhvfkGiLyd+G+e+
  Cse_sc001164.1_g040.1 241 NPKRLREDHQLIATTGGGLNLPHHHNTSGLEVGHFPAEVSSPAVFRCVRVTAIDEEEEQLAYQTAVSIGGHVFKGILYDRGPES 324
                            77788888788888888999**************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MSGFFSLGGG NYNITKDDTQ QQHQQRNDQN HHQETHEDSI ITPNSLYLFK NNEDIYNKGF  60
DLWQQYYQLH QQRHQQQHYD LGVARRKHTN TISDGVEDLC LNSNNNNTSH NNNLYSSWNF  120
VSRSSGSSDS SRVMRAAGYG IVGGDGGGGS SSGGGMNCQD CGNQAKKDCQ HMRCRTCCKS  180
RGFQCHTHVK STWVPAAKRR ERQQQLATLT NQHQQPSLGN QQLSLMMSRG GGASGSGIDQ  240
NPKRLREDHQ LIATTGGGLN LPHHHNTSGL EVGHFPAEVS SPAVFRCVRV TAIDEEEEQL  300
AYQTAVSIGG HVFKGILYDR GPESRYNHPG GGDSSSGGGG TGSQHQQLNL ITSGTMGVAT  360
ATTTVNPNVT SIDPSSIYPT PLNAFMAGTQ FFPPPRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G51060.12e-73SRS family protein