PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001145.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 284aa    MW: 32154.8 Da    PI: 5.862
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001145.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY52.21.2e-1699155259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                            dDgy WrKYGqK + ++++ r    Ct++   gC+++k+v++++++p   ++tY+g+H+++
  Cse_sc001145.1_g050.1  99 DDGYLWRKYGQKAILNAKNQR----CTHKdekGCRATKQVQKTNDEPAKYKTTYNGHHTCT 155
                            8*****************986....88877779**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MLGQPEKVEP DHKSVDSIAV QILGMFDNTL SILNSYTFNE HPDILTEATR INTRSLDFQK  60
SQNCGENAKF VRSGKTKRGC YKRRGNSSTF MKITSSLIDD GYLWRKYGQK AILNAKNQRC  120
THKDEKGCRA TKQVQKTNDE PAKYKTTYNG HHTCTKSHEV SYGISDFLDC SDNSVILDFK  180
TNTLIENKQV DPFFHSSKQI PKENFSSLGL SQEKDDSSSD NYTVSDLLTQ FLDVPLEPMS  240
TIWSGLDHED MISSGLFSSS GTQGYDQIDN MLESWDIGDF LFQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-28WRKY family protein