PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001145.1_g030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 283aa MW: 32073.7 Da PI: 6.7873 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 47.5 | 3.6e-15 | 99 | 155 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy WrKYGqK + ++++ r +r +gC+++k+v++++++p ++tY+g H+++ Cse_sc001145.1_g030.1 99 ADGYLWRKYGQKAILNAKNQRYTHR-DEKGCRATKQVQKTNDEPPKYKTTYNGYHTCK 155 7******************996666.788***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 283 aa Download sequence |
MLGQPEKVES DHKSVDSIAV QILGMFDNTL SILNSYTFNE NPDILTKATR ISTRSLDDQK 60 SQNFGENAKF VRSGKTKRGC YKRRRNTSTY MKITSSLIAD GYLWRKYGQK AILNAKNQRY 120 THRDEKGCRA TKQVQKTNDE PPKYKTTYNG YHTCKKLHEV SYGISDSLNC SDNSVILDFK 180 TNTLTENKQV GLFFHSSKQT PKENFSSLGL SQEHDSSPDN YTASDPLTQL SDVPLEPMSM 240 ISSGLDYEDM ISSGVSSSGG MQNYEIDDML ENYDIGDFLF QLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 4e-27 | WRKY family protein |