PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc001145.1_g030.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 283aa    MW: 32073.7 Da    PI: 6.7873
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc001145.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY47.53.6e-1599155259
                            --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                             Dgy WrKYGqK + ++++ r  +r   +gC+++k+v++++++p   ++tY+g H+++
  Cse_sc001145.1_g030.1  99 ADGYLWRKYGQKAILNAKNQRYTHR-DEKGCRATKQVQKTNDEPPKYKTTYNGYHTCK 155
                            7******************996666.788***************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MLGQPEKVES DHKSVDSIAV QILGMFDNTL SILNSYTFNE NPDILTKATR ISTRSLDDQK  60
SQNFGENAKF VRSGKTKRGC YKRRRNTSTY MKITSSLIAD GYLWRKYGQK AILNAKNQRY  120
THRDEKGCRA TKQVQKTNDE PPKYKTTYNG YHTCKKLHEV SYGISDSLNC SDNSVILDFK  180
TNTLTENKQV GLFFHSSKQT PKENFSSLGL SQEHDSSPDN YTASDPLTQL SDVPLEPMSM  240
ISSGLDYEDM ISSGVSSSGG MQNYEIDDML ENYDIGDFLF QLW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.14e-27WRKY family protein