PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc001139.1_g040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 238aa MW: 27185.2 Da PI: 6.723 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.3 | 4.1e-30 | 119 | 178 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv+rs ++p++++++YegeHnh+ Cse_sc001139.1_g040.1 119 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQRSLDEPDLLVTIYEGEHNHK 178 58***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MVEPSLGIDL NVTPFHKTDD TPKNNEDKLN QMNLENKKLK EMLSRVSDNH NSLQNHVSKL 60 MQERDLLASS LNKRKSGESD ECNTSGSTEN HHQGSLKRPN NGITRVYTRT DPSDKSLVVK 120 DGYQWRKYGQ KVTRDNPSPR AYYKCSFAPS CPVKKKVQRS LDEPDLLVTI YEGEHNHKST 180 DNEHETQASA VRFNSPMELG KFDDTLVEQM ANSLRRNPDF IEDLAEAISS KIFENDLF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31800.2 | 4e-54 | WRKY family protein |