PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000996.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 376aa MW: 41922.2 Da PI: 8.9482

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000996.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	68.5	1e-21	135	191	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dD y+WrKYG+K+vkg +r+YY+C++ C +kk +e ++ ++v++i+Y+g+H+h+ Cse_sc000996.1_g060.1 135 DDSYTWRKYGRKQVKGPGSSRGYYKCSYGACDAKK-IESYDQFNSVTKIVYKGQHKHD 191 8******************************98.*******************7 PP
2	WRKY	87.7	1e-27	271	328	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dgy+WrKYGqK+vkg+++pr+YY+C sagCpv+k++e + + v+itY+g H+h+ Cse_sc000996.1_g060.1 271 ADGYRWRKYGQKMVKGTPHPRNYYKCISAGCPVRKHIENVVDGSSEVTITYKGLHDHD 328 6**************************************9999**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MFRAKTCLVS RLHIRNQINI STNSDMDEND DNTTHPTSIV MSADLSEVPV TYDVRQDELE 60 RFKNHLQGSH QEALATIIAQ AHSESEIKSS PTGLSVMPVT LSPKCSDLQT ETHVAEANQK 120 ETTDPKSLHA VETPDDSYTW RKYGRKQVKG PGSSRGYYKC SYGACDAKKI ESYDQFNSVT 180 KIVYKGQHKH DPPKKVIAKG DEILSTPESL KRKTTSTSGL KENQSSGCAP IQIVHIDDSW 240 VKPRPRYEYV PKHPKKPKFT VQAAADIEIS ADGYRWRKYG QKMVKGTPHP RNYYKCISAG 300 CPVRKHIENV VDGSSEVTIT YKGLHDHDMP VPRKGQGPPS DVLITAVSSA SQNISQPTRR 360 ESAPTLLSIG FEIKQC

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MFRAKTCLVS RLHIRNQINI STNSDMDEND DNTTHPTSIV MSADLSEVPV TYDVRQDELE  60
RFKNHLQGSH QEALATIIAQ AHSESEIKSS PTGLSVMPVT LSPKCSDLQT ETHVAEANQK  120
ETTDPKSLHA VETPDDSYTW RKYGRKQVKG PGSSRGYYKC SYGACDAKKI ESYDQFNSVT  180
KIVYKGQHKH DPPKKVIAKG DEILSTPESL KRKTTSTSGL KENQSSGCAP IQIVHIDDSW  240
VKPRPRYEYV PKHPKKPKFT VQAAADIEIS ADGYRWRKYG QKMVKGTPHP RNYYKCISAG  300
CPVRKHIENV VDGSSEVTIT YKGLHDHDMP VPRKGQGPPS DVLITAVSSA SQNISQPTRR  360
ESAPTLLSIG FEIKQC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	2e-69	WRKY family protein