PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000966.1_g080.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 284aa    MW: 32706.1 Da    PI: 7.2692
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000966.1_g080.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.91.4e-5151291128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhP+deelv++yL +k++++++++  +i+++d+yk++Pw+Lp ++  +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg 
  Cse_sc000966.1_g080.1   5 LPPGFRFHPNDEELVMHYLIRKCASQSISV-PIIADIDLYKFDPWQLPGMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGA 91 
                            79****************************.88***************6666689********************************* PP

                    NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk++ +   ++vg+kk Lvfy g+ap+g+kt+W+mheyrl
  Cse_sc000966.1_g080.1  92 DKPIGK--PKAVGIKKALVFYAGKAPRGVKTNWIMHEYRL 129
                            ****98..778***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MTLELPPGFR FHPNDEELVM HYLIRKCASQ SISVPIIADI DLYKFDPWQL PGMALYGEKE  60
WYFFSPRDRK YPNGSRPNRA AGTGYWKATG ADKPIGKPKA VGIKKALVFY AGKAPRGVKT  120
NWIMHEYRLA NVDRSAGKRS NNLRLDDWVL CRIYNKKGVL EKHINSEVKS TQFSEMEIET  180
KPKITPYAPV SNMSSLHPPP SIPHHVMDDG INFESSESVP TLQTDSSSEH EREVQSEVKK  240
DDFQFNYMDS FADDAFTPQN QYYNDFQLSP LQDIFMFMPK SYQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-117NAC family protein