PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000936.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 355aa MW: 40776.5 Da PI: 7.0939

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000936.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.1	6.1e-10	22	93	2	73
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 Wt +e L++ +e + r + + ++W+ + +++ + ++r+ +qC+ kw++l +ykkik++ +k++s Cse_sc000936.1_g020.1 22 WTVEESPILVNEIAAIEADCRGTLSSFQKWKIIFENCNALEVNRNLNQCRRKWDSLLSDYKKIKQSGSKKAS 93 888888889999999999999999999**************************************9998643 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MDHHETGTTS SLRTRSKAAP DWTVEESPIL VNEIAAIEAD CRGTLSSFQK WKIIFENCNA 60 LEVNRNLNQC RRKWDSLLSD YKKIKQSGSK KASFNNELFK AILRYVREFE EGVGVGVILT 120 LRMVMRCLEV KTRSISERCL EVKTRSISER CLEVKTQDIR ERCLVDLVKG ISEKCLRCTF 180 DMRIAHESPR PSFDPNAPLG PRHLLFHPIH KDIHGPLYGD QPLPTSISPH IEDIEESMWD 240 DNPVREEIQA KLQHLHQFNN MVDSHLSETM QMQNALLASI ITNPNTTTNI NTSTIPPPQT 300 HQPYCPPRHG CSTCEQTAQT IDRTRVMVHD FQEEMRFILN HILERLNALS HPPSH

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MDHHETGTTS SLRTRSKAAP DWTVEESPIL VNEIAAIEAD CRGTLSSFQK WKIIFENCNA  60
LEVNRNLNQC RRKWDSLLSD YKKIKQSGSK KASFNNELFK AILRYVREFE EGVGVGVILT  120
LRMVMRCLEV KTRSISERCL EVKTRSISER CLEVKTQDIR ERCLVDLVKG ISEKCLRCTF  180
DMRIAHESPR PSFDPNAPLG PRHLLFHPIH KDIHGPLYGD QPLPTSISPH IEDIEESMWD  240
DNPVREEIQA KLQHLHQFNN MVDSHLSETM QMQNALLASI ITNPNTTTNI NTSTIPPPQT  300
HQPYCPPRHG CSTCEQTAQT IDRTRVMVHD FQEEMRFILN HILERLNALS HPPSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	2e-35	Trihelix family protein