PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000932.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 149aa MW: 16927.4 Da PI: 10.0133 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.6 | 1.4e-08 | 52 | 93 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 g+++ +E l++++++ lG++ + Ia+++ gRt+ +k++w Cse_sc000932.1_g060.1 52 GSFSLQEAALIIELHNILGNK-RAQIASYLA-GRTDSAVKNFWI 93 67999****************.*********.***********6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
RYGITLPFFR HTTYGRHGCW SSIPNLASGL QRCGKSWRLR WNNYLRPGLK IGSFSLQEAA 60 LIIELHNILG NKRAQIASYL AGRTDSAVKN FWISNTKKKL IQFQLQTIND QARHADATLP 120 SVKPDQETEN EVDLDVVVVG FMDNKLIDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13890.2 | 2e-39 | MYB family protein |