PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000922.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 313aa    MW: 35572.1 Da    PI: 6.7774
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000922.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.62.1e-161562148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd+ l  +++++G ++W + +++ g++R++k+c++rw +yl
  Cse_sc000922.1_g030.1 15 KGPWTPEEDKVLTSYIQKHGHDSWPALPKRAGLNRCGKSCRLRWINYL 62
                           79********************************************97 PP
2Myb_DNA-binding56.75.3e-1868113148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++T+eEd l++ ++  lG++ W++Ia+ ++ gRt++++k++w++++
  Cse_sc000922.1_g030.1  68 RGNFTEEEDNLIISLHSTLGNK-WSRIASQLP-GRTDNEIKNYWNTHM 113
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGRPPCCSES SALKKGPWTP EEDKVLTSYI QKHGHDSWPA LPKRAGLNRC GKSCRLRWIN  60
YLRPDIKRGN FTEEEDNLII SLHSTLGNKW SRIASQLPGR TDNEIKNYWN THMRKKFLKE  120
GIDPQTHRPI PSLSLFLNAI PQFNASSSNF PFRVPNLMSP LISINDQLLH NILQIINMTP  180
LANTNKLSAS LNTQCDFKKP DELLSDDMIN PYLMNRSEDW VKYVNNVALE PNSGCNSSGA  240
NMIGSYGDGF QLRETFTYGK NSSDDIFIEN QLSGLLSMSP EETKNNEVNN DNLLQSNTFQ  300
SGLDDYYDIF MKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16770.28e-74MYB family protein