PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000885.1_g050.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 518aa    MW: 56493.9 Da    PI: 6.9593
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000885.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.3e-30267325259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r a+d++++++tYeg+Hnh+
  Cse_sc000885.1_g050.1 267 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRWADDQTILVTTYEGTHNHP 325
                            7***************************99****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    
MTKFSFGPTL DTSEPLVLLN KSSRWNPFAM VPNSPPHAAA DGHDRKVLAE MDLFSTKSNS  60
NLVVKKEDFH ASDLDVNTGL DLLTRVSGDR SSTGDISSDE NRYTSKLAKI QSELEKTNLE  120
NQRLKEMYLQ VSNNYSALQV QFVALMQQHE QDHMRTEIIQ KQDQKVDNLS QQVSVAVPRQ  180
FMEMTSRGSS SEEKTLSGSG LNTVELSKNA DIDGKTVRRE DTPDSNVWTS NKVPRLVVPE  240
NNEQTNDATM RKVRVSVRAR SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMATGCPV  300
RKQVQRWADD QTILVTTYEG THNHPLPPAA VAMASTTSAA ATMLLSGSMS SSDGYMNPNL  360
LAQAIRPGSS SIASISASAP FPTITLDLTH PPNTLQTLNA TPFEGHPPSQ YFQPPSAMPL  420
QAFQQAGAAA LYNQSRFSGS QFSQDKISNQ VLPQNHQSQP QTSFTNSLSA ATAAITADPN  480
FTAALAAAIT SIMGGNAGAI TSNNNNDNNS AYNNTHDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-103WRKY family protein