PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000885.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 518aa MW: 56493.9 Da PI: 6.9593 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.3 | 4.3e-30 | 267 | 325 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r a+d++++++tYeg+Hnh+ Cse_sc000885.1_g050.1 267 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRWADDQTILVTTYEGTHNHP 325 7***************************99****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 518 aa Download sequence |
MTKFSFGPTL DTSEPLVLLN KSSRWNPFAM VPNSPPHAAA DGHDRKVLAE MDLFSTKSNS 60 NLVVKKEDFH ASDLDVNTGL DLLTRVSGDR SSTGDISSDE NRYTSKLAKI QSELEKTNLE 120 NQRLKEMYLQ VSNNYSALQV QFVALMQQHE QDHMRTEIIQ KQDQKVDNLS QQVSVAVPRQ 180 FMEMTSRGSS SEEKTLSGSG LNTVELSKNA DIDGKTVRRE DTPDSNVWTS NKVPRLVVPE 240 NNEQTNDATM RKVRVSVRAR SEAPMITDGC QWRKYGQKMA KGNPCPRAYY RCTMATGCPV 300 RKQVQRWADD QTILVTTYEG THNHPLPPAA VAMASTTSAA ATMLLSGSMS SSDGYMNPNL 360 LAQAIRPGSS SIASISASAP FPTITLDLTH PPNTLQTLNA TPFEGHPPSQ YFQPPSAMPL 420 QAFQQAGAAA LYNQSRFSGS QFSQDKISNQ VLPQNHQSQP QTSFTNSLSA ATAAITADPN 480 FTAALAAAIT SIMGGNAGAI TSNNNNDNNS AYNNTHDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G62300.1 | 1e-103 | WRKY family protein |