PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000838.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TALE

Protein Properties

Length: 315aa MW: 36900.3 Da PI: 5.4798

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000838.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	254	287	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp+++++ LA+++gL+++q+ +WF N+R ++ Cse_sc000838.1_g010.1 254 WPYPTEADKIALAESTGLDQKQINNWFINQRKRH 287 69*****************************885 PP
2	ELK	31.9	2.9e-11	208	228	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 LK+ LlrKYs y++sLk+EFs Cse_sc000838.1_g010.1 208 LKEKLLRKYSKYISSLKHEFS 228 9*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 315 aa Download sequence
MSETYHPTSL YMEEMYGLTN YQQGGVQQDN YQPRRMFGSG SNIQTTSSND KQQNNNELAE 60 ELDDDLLRET RAKILSHPLY PKLLQVYIAC QKVGAPTDIA NLFDEIFKDN DFCRRSSSCS 120 CLGDDPELDE FMETYCEMLD KYRLDLARPF DEATTFLNNM QTQLNNLCKG TTVTYNADES 180 VERSEEDLIN RGETEVLKSN WTNEDRALKE KLLRKYSKYI SSLKHEFSNK KKKGKLPKEA 240 RQVLLDWWNI HYRWPYPTEA DKIALAESTG LDQKQINNWF INQRKRHWKP SENMQFAVMD 300 TLCGSFLVYT SRPHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-100	TALE family protein