PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000792.1_g090.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

GRF

Protein Properties

Length: 332aa MW: 37513.5 Da PI: 8.9603

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000792.1_g090.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.6	2.5e-24	89	132	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRC +++++++k+CErH+hrgr+rsrk++e Cse_sc000792.1_g090.1 89 DMEPGRCRRTDGKKWRCAKEAYPDSKYCERHMHRGRNRSRKPVE 132 78***************************************987 PP
2	QLQ	56.7	7.2e-20	10	43	3	36
QLQ 3 FTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 FTaaQ+++L++Q+l+yKy+++++PvP +L++ ++ Cse_sc000792.1_g090.1 10 FTAAQWEELEQQALIYKYMVSGVPVPTDLIMSVR 43 ******************************9997 PP

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence
MMTSNHLNVF TAAQWEELEQ QALIYKYMVS GVPVPTDLIM SVRRSLYSST FSSSASLSTQ 60 PTLGVWEGSY QYNQLYQLGG VGGYGRKIDM EPGRCRRTDG KKWRCAKEAY PDSKYCERHM 120 HRGRNRSRKP VEFSASSSSA AASSSTATTV NVSSSPSATI SKSVDTYPSL SSIQTSFMDA 180 SSYSNQALKD YRYMQGLKDL GEDERSTYFH LNDPFNTQKM AAASSSDHHN YSHFSFQNLK 240 DQQQRKNEET QGQHCFVMGT DFINSSEEKA KSRIQINTKV EETAAKQPFH HFFSTPKTTP 300 NPNPNHDANW VDAPKSPLST QELFQSKPRP YW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	5e-35	GRF family protein