PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000734.1_g090.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 191aa MW: 22490.9 Da PI: 6.5304 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 68.3 | 9.8e-22 | 13 | 66 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 R++f++eq++ Le +Fe +++p +++++LA+klgL rqV +WFqNrRa+ k Cse_sc000734.1_g090.1 13 GRRRFSDEQIRFLEYMFETQSKPELSMKQQLANKLGLHPRQVAIWFQNRRARSK 66 699*************************************************99 PP | |||||||
2 | HD-ZIP_I/II | 107 | 1.4e-34 | 14 | 104 | 3 | 93 |
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 +rr+s+eq+++LE +Fe+++k e + K++la++Lgl+prqva+WFqnrRAR k++q+E +y+ L+++yd+l++ e+L++e+++L ++ Cse_sc000734.1_g090.1 14 RRRFSDEQIRFLEYMFETQSKPELSMKQQLANKLGLHPRQVAIWFQNRRARSKSRQTELEYNNLQQNYDTLVSMSESLKEENQALLNQ 101 79************************************************************************************99 PP HD-ZIP_I/II 91 lke 93 l++ Cse_sc000734.1_g090.1 102 LQT 104 986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MLSIETTKNK NEGRRRFSDE QIRFLEYMFE TQSKPELSMK QQLANKLGLH PRQVAIWFQN 60 RRARSKSRQT ELEYNNLQQN YDTLVSMSES LKEENQALLN QLQTLRQLAN TQQGNITTRH 120 DFTNMSRNKE LSGTISLSMT NNSTLLSENY NHQIVDPFKD NTSFAQDDRR ILDTEDQSGS 180 LVPDHPNWWE F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 1e-33 | HD-ZIP family protein |