PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000395.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 239aa    MW: 27659 Da    PI: 4.7455
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000395.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.73.2e-11107182579
                            -..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-E CS
                     B3   5 ltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDf 79 
                             t+ +  + +r+++p+k+a +h    g    + + l ++d++g++W+v ++++ + + ++  +  ++F  +++L++gD+
  Cse_sc000395.1_g050.1 107 STTDSDIRYCRMRIPRKYAMAHfpeiG---DKAVSLNIMDTDGKEWRVSFSHWPYYDNTYAMSDLRDFYVSKKLQAGDT 182
                            577888999*************97633...35678***********************99999***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MYQQCCSNHA DIFDFHNYKG VCTDDQEIIK SMVHDLRNNK EVAFFDDFMI YCYHMIVGFC  60
NYMMHDSGGI TCNQCSDTNS LLGRDCSNDE SHSTDVTDLA NDTELVSTTD SDIRYCRMRI  120
PRKYAMAHFP EIGDKAVSLN IMDTDGKEWR VSFSHWPYYD NTYAMSDLRD FYVSKKLQAG  180
DTGDSYQCFS LYECISKVGE VQLVEKFFLE KNAYLFSVAF YRRDTDGKIV IPYAVSPTH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21550.11e-10B3 family protein