PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000392.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 348aa MW: 39667 Da PI: 5.8599

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000392.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.1	8.8e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d++++ G g+W+t ++ g+ R++k+c++rw +yl Cse_sc000392.1_g020.1 14 KGPWTAEEDQKLIDYIQKNGYGNWRTLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.6	5.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ Cse_sc000392.1_g020.1 67 RGRFSFEEEETIIQLHSVLGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MGRSPCCEKN GLKKGPWTAE EDQKLIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHNPRL DLLDISSILS SSFYSSSHSN MFGVQPMVNP ELLRLAASLL SSQRNNPNPN 180 YAQQNGQENQ FGNPHQVQEN HLVQLQNQDH QTLIQEIPSC APLSDPSCVP FSSECAQLME 240 PNVDQLPSSY SHFNTQTCQL NDWQNNLDNF MPMENYGYQS NLTSSDYDFN SQISTLSTPS 300 SSPAPLNSNS NSTNYINGSS TEDEREISYC GNLFKYEYQD ILDSNVFM

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MGRSPCCEKN GLKKGPWTAE EDQKLIDYIQ KNGYGNWRTL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSVLGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHNPRL DLLDISSILS SSFYSSSHSN MFGVQPMVNP ELLRLAASLL SSQRNNPNPN  180
YAQQNGQENQ FGNPHQVQEN HLVQLQNQDH QTLIQEIPSC APLSDPSCVP FSSECAQLME  240
PNVDQLPSSY SHFNTQTCQL NDWQNNLDNF MPMENYGYQS NLTSSDYDFN SQISTLSTPS  300
SSPAPLNSNS NSTNYINGSS TEDEREISYC GNLFKYEYQD ILDSNVFM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	2e-93	MYB family protein