PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000364.1_g050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 231aa MW: 26976.7 Da PI: 4.4738 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 90.8 | 1.1e-28 | 33 | 90 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D ++WrKYGqK++kgs++pr+YY+C+++ +C++kk+ve +++d ++++itY+++Hnh+ Cse_sc000364.1_g050.1 33 DSWSWRKYGQKPIKGSPHPRGYYKCSTSkSCTAKKQVEICRTDSSMLIITYTSTHNHP 90 99***********************9988****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MQGRKVGEKI VVKVKLEENE GKKKSDQNHP SCDSWSWRKY GQKPIKGSPH PRGYYKCSTS 60 KSCTAKKQVE ICRTDSSMLI ITYTSTHNHP NPANNKQTKN DSKSEISTTP EPDQESEEEK 120 PVEPDQEYEE EKPVEPDQEY EEEKPAVVTL ENDDFRYIQT PEEETHLTVN LENTYFYEEP 180 LMYPDLMNFS SLKTEENDFY DELEELPMSS STFKSFMRSN FFEERVLVQP S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58710.1 | 3e-27 | WRKY family protein |