PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000363.1_g110.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 310aa MW: 34812.6 Da PI: 5.5789

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000363.1_g110.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	89.1	3.8e-28	128	189	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +dDg++WrKYGqK++ g++fprsYYrCt++ +C ++k+v+r++ +p+v++itY+g+H+++ Cse_sc000363.1_g110.1 128 VDDGHSWRKYGQKDILGAKFPRSYYRCTYRkaeKCLATKQVQRTDANPTVFDITYKGKHTCN 189 59*************************99999************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MESACVYGQK TLINELSQGL QMAKQLKGNL NSPEARDIIQ KILASYDNAL LVLKSGESAG 60 QREPNDFPAS SLTESLITIA SPQSVRSEFN QPFSNEHDQN VVSKKRKGST VCEDQVKMCT 120 DDGLEGSVDD GHSWRKYGQK DILGAKFPRS YYRCTYRKAE KCLATKQVQR TDANPTVFDI 180 TYKGKHTCNH HARLAEPPLP EKHEINTTHH QQLSRPNPGE MLSNLRANLT VNTSDFGATD 240 PHSFSFPLEP FGIIEDYQQL HLPNDFDDEL LQVYSPPFIS PGTSDSNCYT DWDSSPSLNF 300 TADLDRDFKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G11070.1	6e-51	WRKY family protein