PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000314.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | MYB_related | ||||||||
Protein Properties | Length: 100aa MW: 11432.8 Da PI: 9.8468 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.7 | 1.1e-07 | 15 | 58 | 3 | 44 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 +WT +++ +a + + ++ +W+ Iar +g g++ ++k ++ Cse_sc000314.1_g020.1 15 SWTSRQNKQFEEALAYYNKDtpdRWHNIARAVG-GKSVDEVKRHY 58 7*****************99*************.**********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 100 aa Download sequence |
MASSSMTSSR SSGSSWTSRQ NKQFEEALAY YNKDTPDRWH NIARAVGGKS VDEVKRHYEI 60 LVRDIMQIES DQVPLPIYRD IGSNGRGFAN EQRLLKNLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75250.2 | 8e-34 | MYB_related family protein |