PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000285.1_g080.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 297aa MW: 32558.9 Da PI: 5.6177

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000285.1_g080.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	92.3	3.6e-29	137	195	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs+fpr+YYrC+++ C +kk+vers d +++++ Y+geH h+ Cse_sc000285.1_g080.1 137 NDLWAWRKYGQKPIKGSPFPRNYYRCSTTkACGAKKQVERSPVDSNIFIVSYSGEHIHP 195 79**********************99889*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 297 aa Download sequence
MDDAWDLHAV VRSCTTGTAA DTSAAVNATK VEDYDDGSYN LEVLASGNED NTFLYPAFGK 60 FSGGLEDVYK AGCGGTLQSA RATTSMANVA IDLEQLPMLT DSHSFSLHAM DSQSARPRKR 120 KNQEKTVFQL TQEELSNDLW AWRKYGQKPI KGSPFPRNYY RCSTTKACGA KKQVERSPVD 180 SNIFIVSYSG EHIHPRPTHR SSLAGSTRSN KFNTENNNKP LISLSISSTT NFIEHPPCSS 240 SSPASASSFS PTTSFKEDEC EINEDEYEET VLVPNMGMHE DVLKKFRDMS GGGGGSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	123	ARPRKRKNQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G52830.1	2e-47	WRKY family protein