PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000285.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 318aa    MW: 35107.5 Da    PI: 7.6066
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000285.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding37.36.3e-1259103147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            r +WT  E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  Cse_sc000285.1_g020.1  59 RESWTDPEHDKFLEALQLFDRD-WKKIEAFIG-SKTVIQIRSHAQKY 103
                            789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVSLNPNPPP TGFYSSSSSD NSAMPVVVIP NVGPTSTSSG VVDDCSKKMR KPYTITKSRE  60
SWTDPEHDKF LEALQLFDRD WKKIEAFIGS KTVIQIRSHA QKYFLKVQKS GANEHLPPPR  120
PKRKAAHPYP QKAAKNVPVV SQVTSSFQTS NAQSEPGYIL GTNSSKLVKN SGAIVSQIHN  180
SYVVKDDRVS AGQPTANNCC SSNDTVLKTQ PSSETNEERS YGLQLRVLPD FAQVYGFIGS  240
VFDPNTSGHL QKLKKMDPID VETVLLLMRN LSINLTSPAF EDHRRLLSTY EVESEKETSD  300
DVIDALLDCQ PEQVVHLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.11e-93MYB_related family protein