PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000279.1_g120.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 465aa    MW: 53062.3 Da    PI: 4.2682
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000279.1_g120.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM99.35.5e-31261501128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.sgyWkatg 87 
                            l pG+rF Ptd+el+v+yL++k+e++kl+    i+e  iy+++P++L +k+ + e++wyf ++r++  ++g+r++r+tk + +Wk+  
  Cse_sc000279.1_g120.1  26 LLPGYRFCPTDQELIVNYLQPKLESRKLPP-ARIHEKFIYDYNPEELARKYLSAENKWYFMTPRERMCPNGDRPKRTTKeNDFWKTGN 112
                            579************************999.66**************987778899********************7764889**999 PP

                    NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                             + ev + +++  g k+ L+fy+   +k +kt W+m ey+ 
  Cse_sc000279.1_g120.1 113 AKVEVRDVTQRRLGYKRNLAFYD---EKKRKTAWLMTEYTT 150
                            999999999*************4...44468********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 465 aa     Download sequence    
MYPSIGMDSQ ISANTNQSNR DYVDSLLPGY RFCPTDQELI VNYLQPKLES RKLPPARIHE  60
KFIYDYNPEE LARKYLSAEN KWYFMTPRER MCPNGDRPKR TTKENDFWKT GNAKVEVRDV  120
TQRRLGYKRN LAFYDEKKRK TAWLMTEYTT TDPNLPVGNG TKLNNFVLCK IYKKEKKGDR  180
NMANEDEGND EQNLSNDEPS PRRRRLNPGS NLPNEPQHVW IQEANHHLVA PLQPANCYQQ  240
EANNIDTEGS LTALTGSAQP FTAQTLSANQ DIGSNLDAMT SQTRMNTGHY PITNHTSSTQ  300
PQLVNPHAMT EREMAQSLCG SSACDDQQNR SILIAMDEFL NGASSSTEME AEQLPDYTID  360
TIQSSMISTN GPPDSTADQV PQPDEDFFES NLTDEFPQLF NFSPDDEVPE PANNDTTTPL  420
SDEDFFDCSR AYEFPQLENY EAILDEDLSD FNIMEMMSFE DNELT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137177KKRKTAWLMTEYTTTDPNLPVGNGTKLNNFVLCKIYKKEKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.16e-31NAC family protein