PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000279.1_g050.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 828aa MW: 91554.1 Da PI: 7.3328

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000279.1_g050.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	66.1	5.3e-21	389	488	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+l+ sdv++ grlvlpk++ae+h ++ +e+ l+++d++g+ W +++++ +++s++yvl+ G Fv++ +L++gD+v+F++ Cse_sc000279.1_g050.1 389 FEKQLSASDVSRIGRLVLPKRCAEAHfpQITMPEGCHLVFQDLNGKDWVLQYRFwlNNNSRMYVLE-GFAPFVRSMQLQAGDSVTFSR 475 99************************666667778***********99999999999.*******************7 PP -SSSEE..EEEEE- CS B3 85 dgrsefelvvkvfr 98 + e++lv+++++ Cse_sc000279.1_g050.1 476 LE-PEGKLVMGFRK 488 65.66667766665 PP

Sequence ? help Back to Top
Protein Sequence Length: 828 aa Download sequence
MTSSLEKTCF NSNCGVVLKE EEAKEGWLCR TGELARLCDR CSSAFKDGKF CETYHLNTSG 60 WRCCESCGKQ IHCGCIVSFH MFILLDAGGI ECLDCAKTEY ILTPNPTWPP ASHNLPGPAE 120 KIIDISSKNW KSIAENPVTW RQAPNLSSAS KAQPESPASH HPPGSAERIK DISSKYLGCV 180 PESILKWRQT PSLSSASKAQ PESQCSRPVP WRQAPSLFSA SKAQPESQFR TPFDVNINKS 240 LAKEQWPCCS LGKSTTGDPS QRLVNENRKA RDIQYEWQRD LFKDVSCRSF FNPTVIPLSS 300 VPATTFVAHD QQTEKGNVSG TNVQRPCPPP FVGKPCPNNN GAGPSLEAQA HSAKARGEIQ 360 ILPQHCPRAT DQELQQISGG SNAKVTPLFE KQLSASDVSR IGRLVLPKRC AEAHFPQITM 420 PEGCHLVFQD LNGKDWVLQY RFWLNNNSRM YVLEGFAPFV RSMQLQAGDS VTFSRLEPEG 480 KLVMGFRKVS LASPWDLGDE TTSTSHSTHE EPSKDSIASK SRNPDGIWSE ADNNSNPAKR 540 IKVDNMCSDD KHLKNEQEVI QISVTLEQVQ ELLRPPLNSP TIVLIEGFEF EDFQEAPTIG 600 TPANCSTNHV GSPRSKTVEP TPEHLEQMLP MINNASSSKK NASDDLERVM TIEGVGAFSD 660 LASSQATIRN PRHKHGCTCV VCVQPPSGTK HKSTCSCNVC LAFKRSIPPA VIPHGQKRLE 720 NQVGCSMENP NQSLFADVIR HYEMGINSHN QKVAGGSERF ENDPFKDKSS ASSFKSQNID 780 LNIQPEREEE FHPVSDSIGL MRLVQESSQR YMRQQKQSIN GVAGNHAL

Sequence ? help Back to Top

Protein Sequence Length: 828 aa Download sequence

MTSSLEKTCF NSNCGVVLKE EEAKEGWLCR TGELARLCDR CSSAFKDGKF CETYHLNTSG  60
WRCCESCGKQ IHCGCIVSFH MFILLDAGGI ECLDCAKTEY ILTPNPTWPP ASHNLPGPAE  120
KIIDISSKNW KSIAENPVTW RQAPNLSSAS KAQPESPASH HPPGSAERIK DISSKYLGCV  180
PESILKWRQT PSLSSASKAQ PESQCSRPVP WRQAPSLFSA SKAQPESQFR TPFDVNINKS  240
LAKEQWPCCS LGKSTTGDPS QRLVNENRKA RDIQYEWQRD LFKDVSCRSF FNPTVIPLSS  300
VPATTFVAHD QQTEKGNVSG TNVQRPCPPP FVGKPCPNNN GAGPSLEAQA HSAKARGEIQ  360
ILPQHCPRAT DQELQQISGG SNAKVTPLFE KQLSASDVSR IGRLVLPKRC AEAHFPQITM  420
PEGCHLVFQD LNGKDWVLQY RFWLNNNSRM YVLEGFAPFV RSMQLQAGDS VTFSRLEPEG  480
KLVMGFRKVS LASPWDLGDE TTSTSHSTHE EPSKDSIASK SRNPDGIWSE ADNNSNPAKR  540
IKVDNMCSDD KHLKNEQEVI QISVTLEQVQ ELLRPPLNSP TIVLIEGFEF EDFQEAPTIG  600
TPANCSTNHV GSPRSKTVEP TPEHLEQMLP MINNASSSKK NASDDLERVM TIEGVGAFSD  660
LASSQATIRN PRHKHGCTCV VCVQPPSGTK HKSTCSCNVC LAFKRSIPPA VIPHGQKRLE  720
NQVGCSMENP NQSLFADVIR HYEMGINSHN QKVAGGSERF ENDPFKDKSS ASSFKSQNID  780
LNIQPEREEE FHPVSDSIGL MRLVQESSQR YMRQQKQSIN GVAGNHAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	2e-66	B3 family protein