PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cse_sc000234.1_g020.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
|
||||||||
Family | SBP | ||||||||
Protein Properties | Length: 170aa MW: 19227.5 Da PI: 9.7918 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 129.7 | 1.1e-40 | 58 | 135 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C+++l+eak+yhrrh+vCe h+ka++v+v+g +qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk+++ Cse_sc000234.1_g020.1 58 CCQAEKCTSNLAEAKQYHRRHRVCESHAKAQAVVVAGNHQRFCQQCSRFHELSEFDEAKRSCRRRLAGHNERRRKNSM 135 6**************************************************************************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 170 aa Download sequence |
MESNKDFSKE NLSMTKKELL NDRGDGEDGV GGGSSKWDVK KKKAGPNGSG STSVVARCCQ 60 AEKCTSNLAE AKQYHRRHRV CESHAKAQAV VVAGNHQRFC QQCSRFHELS EFDEAKRSCR 120 RRLAGHNERR RKNSMEYKGT GKELVCVQTE DNRGRFQLAI QENSTYLQTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G15270.1 | 8e-44 | SBP family protein |