PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cse_sc000195.1_g060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
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Family | WRKY | ||||||||
Protein Properties | Length: 312aa MW: 34828.3 Da PI: 6.1254 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.1 | 9e-34 | 144 | 202 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCtsa+C vkk+vers+edp++v++tYeg+H+h+ Cse_sc000195.1_g060.1 144 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSASCGVKKRVERSSEDPSTVVTTYEGTHTHP 202 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MADSAFSDQV PSLYGGGYYD INPQGYLDML AFQDYGGASL FDMLQHPTPP QANLVVEPHA 60 PPASAMQETS DLVNTPTTNS SSISSSSNEV HVNEGDDQEN INTRSDDDEE KTTTNKQLKA 120 KKKNPKKQRE PRFAFMTKTE VDHLDDGYRW RKYGQKAVKN SPFPRSYYRC TSASCGVKKR 180 VERSSEDPST VVTTYEGTHT HPCPITPRGM LPETTTYGGL NGGAGGVSSF LLPQIHYPQP 240 SQSFFHNHIN SFNFNNTTTT TSSTIPSTYS HYIREEQSYP LPLSTSLFKD NGLLQDMVSF 300 QIRKEEPKDE HS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 1e-44 | WRKY family protein |