PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000195.1_g060.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 312aa    MW: 34828.3 Da    PI: 6.1254
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000195.1_g060.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.19e-34144202159
                            ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                            ldDgy+WrKYGqK vk+s+fprsYYrCtsa+C vkk+vers+edp++v++tYeg+H+h+
  Cse_sc000195.1_g060.1 144 LDDGYRWRKYGQKAVKNSPFPRSYYRCTSASCGVKKRVERSSEDPSTVVTTYEGTHTHP 202
                            59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MADSAFSDQV PSLYGGGYYD INPQGYLDML AFQDYGGASL FDMLQHPTPP QANLVVEPHA  60
PPASAMQETS DLVNTPTTNS SSISSSSNEV HVNEGDDQEN INTRSDDDEE KTTTNKQLKA  120
KKKNPKKQRE PRFAFMTKTE VDHLDDGYRW RKYGQKAVKN SPFPRSYYRC TSASCGVKKR  180
VERSSEDPST VVTTYEGTHT HPCPITPRGM LPETTTYGGL NGGAGGVSSF LLPQIHYPQP  240
SQSFFHNHIN SFNFNNTTTT TSSTIPSTYS HYIREEQSYP LPLSTSLFKD NGLLQDMVSF  300
QIRKEEPKDE HS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.11e-44WRKY family protein