PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000141.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 907aa MW: 100077 Da PI: 6.106

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000141.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.7	1.1e-28	588	639	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+isle+l+++F++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ Cse_sc000141.1_g020.1 588 AEKSISLEVLQQHFAGSLKDAAKNLGVCPTTMKRICRQHGISRWPSRKINKV 639 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 907 aa Download sequence
MPETEEDNKS NNIFIRQQQE QQQQPVMMTM DLDLDGSWTF DQIFSSVDPS PSSFILDQSF 60 SPLWAFSDDN NGTNDDGGNV NDGGDAKVAG NGALTSDTVS QRLVSDNPVQ IPKKLSSNDV 120 KRRLPLPILD IRPSEYQDAP CVIKERMTMA LRYFIELGEK HVLAQVWAPV KNKGRNVLTT 180 SGQPFVLDPN CTGLHQYRMA SLMYVFSLDG ETDGGLPGRV FRHKLPEWTP NVQYYSDKEY 240 QRLNHALSYN VRGTLALPVF EPSGQSCVGV LELILTSQKI NYAPEVDKVC KALEVGCPLC 300 FSLYAYNYRF GKIGESGGSL SMYLVFSVTQ ICNESRQQAL AEILEVLAAV CESHNFPLAQ 360 TWVPCRHRSV LAYGGGFKKS CSSFDGSCMG QVCMSTTDVA FYVVDAHMWG FREACAEHHL 420 QKGQGVAGRA FETRSSCFCE NITHFSKTEY PLVHYARLFG LVASFAICLR SSHTGDDDYI 480 LEFFLPPNMV DCKDQQTMLG SLLTSMKQHF RSLTVASGEE IGEDGRMVEI IKASVNGDVI 540 DSGLQSIRLS ESVISNGGLL IIKQNTSNGK LDTVEPTTKK SERKRGKAEK SISLEVLQQH 600 FAGSLKDAAK NLGVCPTTMK RICRQHGISR WPSRKINKVN RSLTKLKRVI ESVQGGEGTF 660 TIPSLQTTQI PRGVDSPSWP AAPNGSPTNQ QGSPGSKTYE PTTSPKNEQG PTNQTSGSRE 720 ASTGSPNSPN SHRSCQESQP HEVKAPNPAV KFFVSDALLA APQNEEPFRG MLIEDAGSSH 780 DLTNLCPVAE PLEKVQELTP KVQPFTVRTE MKTITIKASY REDIIRFRMA ANSGIITLKE 840 EVAKRLKLDV GTFDIKYLDD DHEWVLIVCD ADLQECVELS ISSGCNIVRL LVHDLSTNLG 900 SSCESSD

Sequence ? help Back to Top

Protein Sequence Length: 907 aa Download sequence

MPETEEDNKS NNIFIRQQQE QQQQPVMMTM DLDLDGSWTF DQIFSSVDPS PSSFILDQSF  60
SPLWAFSDDN NGTNDDGGNV NDGGDAKVAG NGALTSDTVS QRLVSDNPVQ IPKKLSSNDV  120
KRRLPLPILD IRPSEYQDAP CVIKERMTMA LRYFIELGEK HVLAQVWAPV KNKGRNVLTT  180
SGQPFVLDPN CTGLHQYRMA SLMYVFSLDG ETDGGLPGRV FRHKLPEWTP NVQYYSDKEY  240
QRLNHALSYN VRGTLALPVF EPSGQSCVGV LELILTSQKI NYAPEVDKVC KALEVGCPLC  300
FSLYAYNYRF GKIGESGGSL SMYLVFSVTQ ICNESRQQAL AEILEVLAAV CESHNFPLAQ  360
TWVPCRHRSV LAYGGGFKKS CSSFDGSCMG QVCMSTTDVA FYVVDAHMWG FREACAEHHL  420
QKGQGVAGRA FETRSSCFCE NITHFSKTEY PLVHYARLFG LVASFAICLR SSHTGDDDYI  480
LEFFLPPNMV DCKDQQTMLG SLLTSMKQHF RSLTVASGEE IGEDGRMVEI IKASVNGDVI  540
DSGLQSIRLS ESVISNGGLL IIKQNTSNGK LDTVEPTTKK SERKRGKAEK SISLEVLQQH  600
FAGSLKDAAK NLGVCPTTMK RICRQHGISR WPSRKINKVN RSLTKLKRVI ESVQGGEGTF  660
TIPSLQTTQI PRGVDSPSWP AAPNGSPTNQ QGSPGSKTYE PTTSPKNEQG PTNQTSGSRE  720
ASTGSPNSPN SHRSCQESQP HEVKAPNPAV KFFVSDALLA APQNEEPFRG MLIEDAGSSH  780
DLTNLCPVAE PLEKVQELTP KVQPFTVRTE MKTITIKASY REDIIRFRMA ANSGIITLKE  840
EVAKRLKLDV GTFDIKYLDD DHEWVLIVCD ADLQECVELS ISSGCNIVRL LVHDLSTNLG  900
SSCESSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein