PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc000067.1_g060.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

WRKY

Protein Properties

Length: 466aa MW: 50544.8 Da PI: 5.6578

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc000067.1_g060.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.7	7.4e-31	240	298	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a +Cpv+k+v+r+aed +++++tYeg+Hnh+ Cse_sc000067.1_g060.1 240 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaNCPVRKQVQRCAEDRTILITTYEGNHNHP 298 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MDAGGGANTV STSQTTFEQQ QLQPTTIQFP VNIFCAAGDH KPINEMDFFS DKKRDDVIDV 60 DDHSTDENSD HRHDNINTGL HLLTRNTIND QLIQYDEMSL NSDDNRTNVK KSIENEQLKQ 120 ELHLMTMKLQ KREENPIKDN KVSNEGGEGG SEVITYMPRS FMNLGLASLE DENSRSSSDG 180 KSSDGKDHRE EILEQVIANK VPRLEVKNDG NGSIDQATEA TIRKARVSVR ARSEXTYIIT 240 DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAN CPVRKQVQRC AEDRTILITT YEGNHNHPLP 300 PAAMAMSSTT SSAARMLLSG SMPSADGIIN SNFLARTLLP CSSNMATISA SAPFPTVTLD 360 LTQSPNSLPS GQNPALLPQI IGQGLYNQSK FSGLQLSQDT LASRAALADT VNALTTNPSF 420 TAALAVAISS IIGGGAGGDN SNTAVNNNTF SNNNGSVAKE GNFRGN

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MDAGGGANTV STSQTTFEQQ QLQPTTIQFP VNIFCAAGDH KPINEMDFFS DKKRDDVIDV  60
DDHSTDENSD HRHDNINTGL HLLTRNTIND QLIQYDEMSL NSDDNRTNVK KSIENEQLKQ  120
ELHLMTMKLQ KREENPIKDN KVSNEGGEGG SEVITYMPRS FMNLGLASLE DENSRSSSDG  180
KSSDGKDHRE EILEQVIANK VPRLEVKNDG NGSIDQATEA TIRKARVSVR ARSEXTYIIT  240
DGCQWRKYGQ KMAKGNPCPR AYYRCTMAAN CPVRKQVQRC AEDRTILITT YEGNHNHPLP  300
PAAMAMSSTT SSAARMLLSG SMPSADGIIN SNFLARTLLP CSSNMATISA SAPFPTVTLD  360
LTQSPNSLPS GQNPALLPQI IGQGLYNQSK FSGLQLSQDT LASRAALADT VNALTTNPSF  420
TAALAVAISS IIGGGAGGDN SNTAVNNNTF SNNNGSVAKE GNFRGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	8e-93	WRKY family protein