PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc000026.1_g150.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family E2F/DP
Protein Properties Length: 336aa    MW: 36504.8 Da    PI: 6.53
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc000026.1_g150.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP862.8e-2791172371
                E2F_TDP   3 eksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 
                            +++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+w+g
  Cse_sc000026.1_g150.1  91 GRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfsdpgngdqppdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWRG 172
                            689*******...*****999*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MMGSNQKMDN VGGRSGNGSW GTTGSGQSTS GSGGGSPSDV AMAVTPASEN TFLRLNHLDI  60
STGDDAGSQG ANNNGKKKKR AQRATGGDKG GRGLRQFSMK VCEKVESKGR TTYNEVADEL  120
VAEFSDPGNG DQPPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW RGLPRTTIND  180
IEELKSERLG LKSRIDKKAA YLRELEDQHV GLQNLIKRNE ELYGSGNAPS GGVALPFILV  240
QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNYVLKAM KLGDESNDVC REGGVGPNMS  300
AMSQPQVPLP PPVGSSRPPP SPPLPGILKG RVKYEH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-121E2F/DP family protein