PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62044690-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family TCP
Protein Properties Length: 270aa    MW: 30772.6 Da    PI: 8.6554
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62044690-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP47.95.1e-153713445133
             TCP  45 sktieWLlqqakpaikeltgt......ssssasec..eaesssssasnsssgkaaksaa.kskksqksaasalnlak..esrakarararertre 128
                     +kt+ WLl+ +k+ai+el++t       +++ +e+    ++++  +sn++ +++++s++ k++++++ + +++n+ +    r++ar+rarertr+
  AUR62044690-RA  37 GKTLGWLLTHSKAAIDELASTsnlkppVTPDDNEVvvI-NDQEYCTSNNNDDEKSSSKKrKRRENSHLN-NTRNVVNelRRREEARERARERTRK 129
                     8********************55555423333444431.222222223444455555552555555555.567777746677************* PP

             TCP 129 kmrik 133
                     k+  +
  AUR62044690-RA 130 KKIVD 134
                     98665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MGCYARRMYV FRVLEEQLER KIGIPRSPLL KGLEIGGKTL GWLLTHSKAA IDELASTSNL  60
KPPVTPDDNE VVVINDQEYC TSNNNDDEKS SSKKRKRREN SHLNNTRNVV NELRRREEAR  120
ERARERTRKK KIVDDHHLES SSSSMICHQS NPAIMSXXXX XXXLSSNGLI SKEGSSTVRE  180
SVVIKGNYNN KSKGSSYNNY NYEMISSKDE QDSCNYYNDY FNKPASESCN YYSGILQPTG  240
FPALNIINLS TEIHINARPW ETYSNHILH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
19398KKRKRR
2114131RRREEARERARERTRKKK