PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62043447-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

MYB_related

Protein Properties

Length: 1176aa MW: 130363 Da PI: 9.7825

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62043447-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.3	1e-09	46	81	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE +++++a +++G++ Wk++a+ + +R+ +++ AUR62043447-RA 46 QWSKEELQRFYEAYRKYGKD-WKKVAAAVR-NRSVEMV 81 5***************99.*****.98876 PP

Sequence ? help Back to Top
Protein Sequence Length: 1176 aa Download sequence
MAPTRKSRSV NKRFSYPNEI SPAKDGDTAN KSNKRKRKVS DMLGAQWSKE ELQRFYEAYR 60 KYGKDWKKVA AAVRNRSVEM VEALYTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLEGSDS 120 EQESNDGVGM PRKSHKRTRA KGHPNTARNL SDVSHSQAVA SNYGCLSLLK KKRSGGNQPR 180 AVGKRTPRIP VRYTYDKDSI GRYISPVRQG PKSKLDANDD DVAHEVALTL AEASHRGGSP 240 QVSQTPSKRR ETVSKSPGGL GEGVCSESEM TSAKNVGNEM DDFGCEGSLG STEGDNNFSR 300 EKPQSGGRKG AGRPAQQKAK KSYGKKVEAE DTGHHGDDIK EACSGTEGGQ RFSCFELKHG 360 PEARDATFIR PSGQASKKRS KKVLFGGDEG VALDALQALA DLSFMMPSST AEAESTAPHK 420 EDKESDINTF RPQDTIPTSQ RVKPKFSPSK KKGDQTMLNS LVSESKKSKL AKVSALDSSP 480 VAEIKDLGMR KRKPKSSAFK NAASEVQIFA GVNAFQEKVP DQGLKSVNKI RQFSNNASQQ 540 QLGHLVKISE HSSSSTDIRR DGDDSAVSSV QAPETSEVNV PTKSRSKRKV DKAQIQRSDI 600 FVNEQSNTSG QSYHDKTVYL KERLCNCLSS HLVRRWCVYE WFYSAIDYPW FAKCEFVEYL 660 YHVGLGHVPR LTRVEWGVIR SSLGKPRRFS QQFLKEEKEK LNYYRESVRS HYSELRMGKR 720 EGLPTDLARP LTVGQRVIAI HPRSREIHNG KVLTVDHNVC RIQFDRPELG VEFVKDIDCM 780 PLNPVENMPT SLKRHDGAID KFYEALKQFK ANERSEDRMK EEIIKLTPSQ KMESALGTSN 840 VAPFYQISDL SKQAKDVFGT PSSHEKTGQT DVVSPQQSAL FHLQAKEADI RALAELSRAL 900 DKKNALVTEL KRMNDDVYEN HSLKYLESFK KQYAAVLVQL NEVLDQVSSA LTCLRQRNTY 960 QGNSLVPWQK TKANLDDHGS VVSSLNCFPC DSQRTGSHVC EIVDTSRIKA RKMVDAALKA 1020 ISSLNVAMDT IQKIEEVVDF VNNQLMVDDS GMSVQASQLS GSLSRQNQLI NVVASEQAHD 1080 SRSNGAVAPH DAKIPSELIA NCVATLLMIQ NHRSSTIRTL ISKMSVASTL LANFFALALV 1140 ILARRMHESL AFVILGNGLA CLTFWSKGFL KEGAH*

Sequence ? help Back to Top

Protein Sequence Length: 1176 aa Download sequence

MAPTRKSRSV NKRFSYPNEI SPAKDGDTAN KSNKRKRKVS DMLGAQWSKE ELQRFYEAYR  60
KYGKDWKKVA AAVRNRSVEM VEALYTMNRA YLSLPEGTAS VVGLIAMMTD HYSVLEGSDS  120
EQESNDGVGM PRKSHKRTRA KGHPNTARNL SDVSHSQAVA SNYGCLSLLK KKRSGGNQPR  180
AVGKRTPRIP VRYTYDKDSI GRYISPVRQG PKSKLDANDD DVAHEVALTL AEASHRGGSP  240
QVSQTPSKRR ETVSKSPGGL GEGVCSESEM TSAKNVGNEM DDFGCEGSLG STEGDNNFSR  300
EKPQSGGRKG AGRPAQQKAK KSYGKKVEAE DTGHHGDDIK EACSGTEGGQ RFSCFELKHG  360
PEARDATFIR PSGQASKKRS KKVLFGGDEG VALDALQALA DLSFMMPSST AEAESTAPHK  420
EDKESDINTF RPQDTIPTSQ RVKPKFSPSK KKGDQTMLNS LVSESKKSKL AKVSALDSSP  480
VAEIKDLGMR KRKPKSSAFK NAASEVQIFA GVNAFQEKVP DQGLKSVNKI RQFSNNASQQ  540
QLGHLVKISE HSSSSTDIRR DGDDSAVSSV QAPETSEVNV PTKSRSKRKV DKAQIQRSDI  600
FVNEQSNTSG QSYHDKTVYL KERLCNCLSS HLVRRWCVYE WFYSAIDYPW FAKCEFVEYL  660
YHVGLGHVPR LTRVEWGVIR SSLGKPRRFS QQFLKEEKEK LNYYRESVRS HYSELRMGKR  720
EGLPTDLARP LTVGQRVIAI HPRSREIHNG KVLTVDHNVC RIQFDRPELG VEFVKDIDCM  780
PLNPVENMPT SLKRHDGAID KFYEALKQFK ANERSEDRMK EEIIKLTPSQ KMESALGTSN  840
VAPFYQISDL SKQAKDVFGT PSSHEKTGQT DVVSPQQSAL FHLQAKEADI RALAELSRAL  900
DKKNALVTEL KRMNDDVYEN HSLKYLESFK KQYAAVLVQL NEVLDQVSSA LTCLRQRNTY  960
QGNSLVPWQK TKANLDDHGS VVSSLNCFPC DSQRTGSHVC EIVDTSRIKA RKMVDAALKA  1020
ISSLNVAMDT IQKIEEVVDF VNNQLMVDDS GMSVQASQLS GSLSRQNQLI NVVASEQAHD  1080
SRSNGAVAPH DAKIPSELIA NCVATLLMIQ NHRSSTIRTL ISKMSVASTL LANFFALALV  1140
ILARRMHESL AFVILGNGLA CLTFWSKGFL KEGAH*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein