PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62043434-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | NAC | ||||||||
Protein Properties | Length: 139aa MW: 15314.2 Da PI: 6.66 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.1 | 2.8e-09 | 66 | 125 | 1 | 49 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..........lelee....vikev.diykvePwdLpk 49 lp+G+rF+Ptd+e++ ++L+ kv+ ++ + + +++ +i++++P++Lp AUR62043434-RA 66 LPAGVRFDPTDQEII-RHLEGKVRPNDespfhglhplI---DefipTLEGEnGICYTHPEKLPG 125 799************.99*****999976766664332...143332444447*********93 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MTWCNEVTDV QTVEKNNSLP SSTSSRPSND NLNTNNVTAR SVKSCPSCGH QIKCQQQAKI 60 NDLPGLPAGV RFDPTDQEII RHLEGKVRPN DESPFHGLHP LIDEFIPTLE GENGICYTHP 120 EKLPGAKPGI KIYRVRDL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28500.1 | 9e-43 | NAC family protein |