PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043347-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 254aa    MW: 28624 Da    PI: 4.832
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043347-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.82.3e-1756104355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     + GVr+++ +gr++AeIrdp++   + r++lg+f+ta eAa a+++a+++++g
  AUR62043347-RA  56 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAHEAALAYDRAALSMKG 104
                     56******.**********965...5************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MSTTNTPQKT FMKPAFEQQQ QICSASMLFP FLQRNTSISQ TNERRGRRKQ AEPGRFLGVR  60
RRPWGRYAAE IRDPTTKERH WLGTFDTAHE AALAYDRAAL SMKGYLGCIV PENCLRPTPP  120
SENDPHHIPN NNNVGYDLTL SHSDNQSMPT PMLLSSSYEP KDDYSFSSFS NNANEENISG  180
NLALEISSNF SDYCDDLATI INHPLMMEEG CMMEGLYPMI EDIAASSYFT MPCAGFSRAP  240
YYDDMLDLGY SLF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.12e-39ERF family protein