PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043310-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family LFY
Protein Properties Length: 303aa    MW: 33764.8 Da    PI: 8.8598
Description LFY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043310-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FLO_LFY183.61.6e-561917346197
         FLO_LFY  46 rklreleelfkayGvryltvakiaelGftvstLvdmkdeelddlmkslseifrldllvGeryGikaavraerrrleeeeaekkrrk.ll...... 133
                         +leelf+ayG+ry+t+akiae+Gftv+tLvdmk+ee+d++m+sls++fr+dllvGeryGikaa+raerrrle+ e+++++r+ ++      
  AUR62043310-RA  19 SGSGGLEELFQAYGIRYYTAAKIAEMGFTVNTLVDMKEEEVDEMMNSLSHLFRWDLLVGERYGIKAAIRAERRRLEDLEESRRHRHnHMslsntp 113
                     33569************************************************************************888888777422456666 PP

         FLO_LFY 134 .sedeetaldalsqeglseepvqeekeaagsggeglgeaelvaaeekkseeekkkaskkkqkrkk 197
                       + +++ ldalsqeglsee v +eke +gsgg++   +e+v+a+ +++++++++++k k+++++
  AUR62043310-RA 114 pPDSSHHPLDALSQEGLSEEGV-HEKEVVGSGGGN---WEMVGAPPTHTNHQDHQQRK-KHRKQQ 173
                     44445569***********988.568999998887...88888886544444444433.222222 PP
2FLO_LFY245.91.9e-75180285280385
         FLO_LFY 280 kvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacykplvaiaarqgwdidavfnahprLsiWYvPtkL 374
                      vtnqvfr+akkaga+yinkPkmrhYvhCYalhcLdee+snalrrafkergenvGawrqacykplvaiaarqgwdida+fn+hprLsiWYvPtkL
  AUR62043310-RA 180 TVTNQVFRFAKKAGATYINKPKMRHYVHCYALHCLDEETSNALRRAFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNSHPRLSIWYVPTKL 274
                     69********************************************************************************************* PP

         FLO_LFY 375 rqLChlerska 385
                     rqLCh+ers++
  AUR62043310-RA 275 RQLCHTERSSS 285
                     ********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MGIPGSAAAA ANAGAGASSG SGGLEELFQA YGIRYYTAAK IAEMGFTVNT LVDMKEEEVD  60
EMMNSLSHLF RWDLLVGERY GIKAAIRAER RRLEDLEESR RHRHNHMSLS NTPPPDSSHH  120
PLDALSQEGL SEEGVHEKEV VGSGGGNWEM VGAPPTHTNH QDHQQRKKHR KQQHLQARNT  180
VTNQVFRFAK KAGATYINKP KMRHYVHCYA LHCLDEETSN ALRRAFKERG ENVGAWRQAC  240
YKPLVAIAAR QGWDIDAIFN SHPRLSIWYV PTKLRQLCHT ERSSSNTSNS ISAGAGPHHL  300
PF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61850.14e-65LFY family protein