PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62043270-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

HB-other

Protein Properties

Length: 915aa MW: 101621 Da PI: 7.953

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62043270-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	14.5	6.1e-05	51	107	1	57
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +r+R ++++ l+ ++++F ++ +s++e +e+ + gLt +q + +F +R + +k AUR62043270-RA 51 KRPRDLLNPKALQYMQAVFSMKDAISKKESREIGALFGLTVTQAREYFASQRSRVRK 107 799**************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MEVLKDYPSE IDIGSSMESV QKGMELQKQL FHTQIDQLRN VVVTQCKLTG KRPRDLLNPK 60 ALQYMQAVFS MKDAISKKES REIGALFGLT VTQAREYFAS QRSRVRKLVR LSRERAIRAN 120 GNKELQDIIS ADSDLMLPID TTPLSSIGPD VEEAPSCSNQ DEGLPGLGES EKDFVENIFS 180 SMCKEETFSG QVKLMDWILQ IENPTILCWF LTKGGVMILA TWLSQAATEE QTSVISAVLK 240 VLCHLPLNKA LPAHMSAILQ GVNKLRFYRV PEFCFDIFLV CFKFILHCFL FFSIHINLIR 300 RSDISNRARV LLSKWSKMFV KSQALKKSNG IRAATEQDTD LTQRFGELVG DYSWQSSVDA 360 SDDMLVTSYL GPDDTRKVES IEAMKLLTAS SDESNKKLML GTSTAHIKER RKVQLVEQPG 420 QKSASNSQPI KAVAANQRRP ITADEIQKAK MRAQIMQSSK RKTEGPKKPS LLTNDLLSAS 480 EAYLRPKLEA QKKARLLPPK SSIKQAEFVP EQKPAIDQKE SLLEKCRRVQ IPWLAPPEVH 540 LVAEIGNGEN SKEMEVQRNR IHREKETTYR TLQDVPPNPK EPWDVEMDYD DTLTPEIPID 600 QLPDAEGADT AVTSVESQNP TVAPVDPATS SQAEPDLELL AVLLKNPELV FALTSGQASG 660 LSSEDTVKLL DLLKSNGGAA LLNGQASEKP EEVKVEVSLP SPTPTPTRNV EVSLPSPTPP 720 SRFEVSLPSP TPSTNLGPSG WTTTEAAKNP FSRRAMEIQD TMAVFPVAAA VVTLDRPQNN 780 CGLQPQFPSA ASAYLISEGS NKGVVKARHG LSHTPFSNHV SQNVYNPTMA GSQPGPPRER 840 NDYHMGGHKG YESWSPENSP GPVRYPPEHH HGHGWSYPEQ RERGYGPPDR LSRNRNWRGG 900 GSVNRRWNSG DRRR*

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MEVLKDYPSE IDIGSSMESV QKGMELQKQL FHTQIDQLRN VVVTQCKLTG KRPRDLLNPK  60
ALQYMQAVFS MKDAISKKES REIGALFGLT VTQAREYFAS QRSRVRKLVR LSRERAIRAN  120
GNKELQDIIS ADSDLMLPID TTPLSSIGPD VEEAPSCSNQ DEGLPGLGES EKDFVENIFS  180
SMCKEETFSG QVKLMDWILQ IENPTILCWF LTKGGVMILA TWLSQAATEE QTSVISAVLK  240
VLCHLPLNKA LPAHMSAILQ GVNKLRFYRV PEFCFDIFLV CFKFILHCFL FFSIHINLIR  300
RSDISNRARV LLSKWSKMFV KSQALKKSNG IRAATEQDTD LTQRFGELVG DYSWQSSVDA  360
SDDMLVTSYL GPDDTRKVES IEAMKLLTAS SDESNKKLML GTSTAHIKER RKVQLVEQPG  420
QKSASNSQPI KAVAANQRRP ITADEIQKAK MRAQIMQSSK RKTEGPKKPS LLTNDLLSAS  480
EAYLRPKLEA QKKARLLPPK SSIKQAEFVP EQKPAIDQKE SLLEKCRRVQ IPWLAPPEVH  540
LVAEIGNGEN SKEMEVQRNR IHREKETTYR TLQDVPPNPK EPWDVEMDYD DTLTPEIPID  600
QLPDAEGADT AVTSVESQNP TVAPVDPATS SQAEPDLELL AVLLKNPELV FALTSGQASG  660
LSSEDTVKLL DLLKSNGGAA LLNGQASEKP EEVKVEVSLP SPTPTPTRNV EVSLPSPTPP  720
SRFEVSLPSP TPSTNLGPSG WTTTEAAKNP FSRRAMEIQD TMAVFPVAAA VVTLDRPQNN  780
CGLQPQFPSA ASAYLISEGS NKGVVKARHG LSHTPFSNHV SQNVYNPTMA GSQPGPPRER  840
NDYHMGGHKG YESWSPENSP GPVRYPPEHH HGHGWSYPEQ RERGYGPPDR LSRNRNWRGG  900
GSVNRRWNSG DRRR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G02560.2	1e-125	HB-other family protein