PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62043095-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 282aa    MW: 31313.8 Da    PI: 10.2971
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62043095-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind326.48.4e-10012811301
       GAGA_bind   1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki..rernlalsekkaavaerd.........maflqrdkalaernkalverdnklla 83 
                     md dg  + rn+gyy+p   +k +l+lqlms +a+r   +  re+ l +++++a +++rd         +     d  + e   a ++rdnk+++
  AUR62043095-RA   1 MDGDGGLNmRNWGYYDPP--MK-HLNLQLMSNMADRKPLLgsRESAL-IANSNAGFHQRDyvvpnshypV-----DYNMRE---AWIHRDNKFFN 83 
                     899999999*********..77.************999884455555.66777889****9999644444.....555555...66667****** PP

       GAGA_bind  84 lllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkv 178
                     +l++++s        +++  +t  +++  q     +  +++  +ee+++       ++  + ++  +kkr+ +k++k++k+kk+kk  + +k+  
  AUR62043095-RA  84 MLPTSHS--------YGIPTETAPTHHPMQ-----MLRQPESSNEERTVRI-----EPVCEINNGPMKKRSAGKSEKAPKMKKPKKALSGPKEGG 160
                     ***9887........555555555554333.....3333444344444444.....44455667777888999999**********888886666 PP

       GAGA_bind 179 kkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLa 273
                     + +s  +r+k+ kk++++ +ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+s+krrgaRiagrKmS gafkk+LekLa
  AUR62043095-RA 161 SGSS--QRAKSAKKTTEVIINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTSLSTYPLPMSSKRRGARIAGRKMSLGAFKKVLEKLA 253
                     5555..89*************************************************************************************** PP

       GAGA_bind 274 aeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     aeGy++ np+DL++hWAkHGtnkfvtir
  AUR62043095-RA 254 AEGYNFTNPIDLRTHWAKHGTNKFVTIR 281
                     ***************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDGDGGLNMR NWGYYDPPMK HLNLQLMSNM ADRKPLLGSR ESALIANSNA GFHQRDYVVP  60
NSHYPVDYNM REAWIHRDNK FFNMLPTSHS YGIPTETAPT HHPMQMLRQP ESSNEERTVR  120
IEPVCEINNG PMKKRSAGKS EKAPKMKKPK KALSGPKEGG SGSSQRAKSA KKTTEVIING  180
IDMDISSIPI PVCSCTGAPQ QCYRWGSGGW QSACCTTSLS TYPLPMSSKR RGARIAGRKM  240
SLGAFKKVLE KLAAEGYNFT NPIDLRTHWA KHGTNKFVTI R*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.11e-84BBR-BPC family protein