PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042926-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 391aa    MW: 44755.5 Da    PI: 7.5463
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042926-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.42.2e-1728116299
                     EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     fk +    ++++ +l++p+kf+ e+   +   s   tl+ +sg+ W+v++  +k+ + +++ +GW +Fv ++g+k g f+vF ++g+s+f   v+
  AUR62042926-RA  28 FKLM--IGNFEQ-QLRIPRKFV-ECsRAD--LSSSCTLRGQSGNIWKVQI--QKTEKDVLFVDGWGNFVTDHGIKYGCFLVFCYVGDSSF--EVS 112
                     5555..555555.5********.563433..56689**************..**************************************..999 PP

                     EE-S CS
              B3  96 vfrk 99 
                     vf++
  AUR62042926-RA 113 VFDA 116
                     9986 PP

2B348.41.6e-15274355487
                     E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                     v+++ +v +   l++pk+ a +h ++k ++ +++l+ +   +sW+v ++++ ++++  ++ GW+ Fv +n+L+e D++vF+l ++
  AUR62042926-RA 274 VMKRTHVYRGFHLTIPKEWAVKHLLQK-SDHDVILRVPGVeESWTVGCRWTPSQCQ--FRPGWSTFVLENNLEEHDVCVFELLQK 355
                     677889999999***********7776.45699*9996655*******88888877..89*********************8764 PP

Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MTYVCETCKA LEEDKYWNEI PPRKHRFFKL MIGNFEQQLR IPRKFVECSR ADLSSSCTLR  60
GQSGNIWKVQ IQKTEKDVLF VDGWGNFVTD HGIKYGCFLV FCYVGDSSFE VSVFDATGCE  120
VEGSHFTRNT NMSLNTSCRS LLHVENDESK GDRTLEADID GSVEAFAVDK EHDSDSSSQE  180
NNFRGSKSAK CKAADNGTGI VHEEEDLESL SDSSHHVKRF HNLSLNVRNR ACQVRQPQKY  240
YKSKRRKVTE QEKQGALSKA ISHMSRRRHM IEIVMKRTHV YRGFHLTIPK EWAVKHLLQK  300
SDHDVILRVP GVEESWTVGC RWTPSQCQFR PGWSTFVLEN NLEEHDVCVF ELLQKGDLGN  360
ENNSVFDVHI FRVVKEVVPL TVLRGIKSSV *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-33B3 family protein