PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62042913-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 275aa    MW: 29779.4 Da    PI: 9.3754
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62042913-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.82.8e-143882147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   AUR62042913-RA 38 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 82
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MNVGGQPNTA NEAFYSAGEG PSSSGKKVRK PYTITKSRES WTEEEHDKFL EALQLFDRDW  60
KKIEDFVGSK TVIQIRSHAQ KYFLKVQKNG TADHVPPPRP KRKAAHPYPQ KAPKNVSVLP  120
QAAIAYSASF NAIAPGYPAW SDGSILTNPA TSGITPSDDY NLNIAEDVGR KGFPRISGSS  180
ASGIGSSNRF VATSELPMQG KSPILHGLPD FTEVYSFIGS VFDPKTKGHV GKLKEMDPIN  240
FETRNVLSSY DVTTKTVSLD AGDVAKNQPT DVSC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.12e-85MYB_related family protein