PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

AUR62042615-RA

Organism

Chenopodium quinoa

Taxonomic ID

63459

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium

Family

FAR1

Protein Properties

Length: 662aa MW: 76805.6 Da PI: 6.0812

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
AUR62042615-RA	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	52.7	1.4e-16	135	237	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..............tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 Y+++A +GFs+rk++++ +++ + +tk+++vCs egkr++ +kk ++++ r+++ tr + ka+++ k +k+g++ev + AUR62042615-RA 135 LYEKHAAILGFSIRKHTTRFKQHAKIVTKKNYVCSAEGKRHSGQKKtklvemvdeedvnvKTRKPRQESITRSNSKACIRAKVNKEGQFEVVAHV 229 7***************************************99999*******988888899999********************* PP FAR1 83 leHnHela 90 +HnHel+ AUR62042615-RA 230 IQHNHELT 237 ****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MENLTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA 60 DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATEDTNPI DAYGLDLRGS 120 FVGVVRETFE EILELYEKHA AILGFSIRKH TTRFKQHAKI VTKKNYVCSA EGKRHSGQKK 180 TKLVEMVDEE DVNVKTRKPR QESITRSNSK ACIRAKVNKE GQFEVVAHVI QHNHELTKPQ 240 WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNSMATEA GGEQNIGHSV VDHLNFCSRL 300 RMEQIEAGDA QTLVNILSQE QSEDPNFFFR VKFDKEGRIC NIFWRDSMML EDYRIYGDVL 360 VFDTTYRTNR YNLICAPFVG INNHWHNCMF ACAFIGDETT DSFVWLLQTF FKAMENRKPT 420 SIFTDQDQAM ANAILEVIPN TRHRLCIWHL EQNAITRFGA LKKDKEFKFA FNQCLKMCVT 480 EQEFEAKWQA MLQKYELTEH SWYKRVYELK YKWCPSLCRD FFSAGILSSQ RSESTNHAIG 540 FRASKATTLT EFYTIFKKTT NRWRSTEKYD EFTCSKSIAF TSLPLFGMLK HAAQVFTLSL 600 FRNFEEEFGY SMATTFQMLG SNEECLLYQV TLEDKPWSAH QNSTFAFSNK NTRQVCFKKM 660 D*

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MENLTFDTTN CSNLIHELLQ KQRQIETEFE IDLNRSIIEE EETNCFGDEF VPIFNNPDNA  60
DEAIDNADEA IENAEDAIHN AENQVVPDKS IDSNSEQTTK SDATEDTNPI DAYGLDLRGS  120
FVGVVRETFE EILELYEKHA AILGFSIRKH TTRFKQHAKI VTKKNYVCSA EGKRHSGQKK  180
TKLVEMVDEE DVNVKTRKPR QESITRSNSK ACIRAKVNKE GQFEVVAHVI QHNHELTKPQ  240
WHYLHRSERK MTEEKVVTIK TMKSSGLTTM DTYNSMATEA GGEQNIGHSV VDHLNFCSRL  300
RMEQIEAGDA QTLVNILSQE QSEDPNFFFR VKFDKEGRIC NIFWRDSMML EDYRIYGDVL  360
VFDTTYRTNR YNLICAPFVG INNHWHNCMF ACAFIGDETT DSFVWLLQTF FKAMENRKPT  420
SIFTDQDQAM ANAILEVIPN TRHRLCIWHL EQNAITRFGA LKKDKEFKFA FNQCLKMCVT  480
EQEFEAKWQA MLQKYELTEH SWYKRVYELK YKWCPSLCRD FFSAGILSSQ RSESTNHAIG  540
FRASKATTLT EFYTIFKKTT NRWRSTEKYD EFTCSKSIAF TSLPLFGMLK HAAQVFTLSL  600
FRNFEEEFGY SMATTFQMLG SNEECLLYQV TLEDKPWSAH QNSTFAFSNK NTRQVCFKKM  660
D*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-86	FAR1 family protein