PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62042023-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | ARR-B | ||||||||
Protein Properties | Length: 554aa MW: 60018.6 Da PI: 6.9122 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 77.1 | 2.2e-24 | 167 | 216 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 kprl W+ eLH++Fv+av+qL G +kA Pk+il+lm+v+gLt+e+v+SHLQ AUR62042023-RA 167 KPRLFWSVELHQKFVDAVNQL-GLDKAFPKKILDLMNVEGLTREKVASHLQ 216 79*******************.***************************** PP | |||||||
2 | Myb_DNA-binding | 37.3 | 6.4e-12 | 169 | 216 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwq 45 r+ W+ e+++++vdav+qlG + +k+I m+ +g+t++ + s++q AUR62042023-RA 169 RLFWSVELHQKFVDAVNQLGLDkaFPKKILDLMNvEGLTREKVASHLQ 216 678*******************************************98 PP | |||||||
3 | Response_reg | 83.1 | 8.5e-28 | 15 | 123 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+++ ++l+ ++l+k ++ +v+++ +++eal++lk+++ +D+++ D+emp+m+G++ll+ + e ++lp+i+++a+++ + + + ++ G AUR62042023-RA 15 VLVVDDDNTSLKLMDNLLRKCHF-HVTTTNQAKEALRILKANKnkYDIVISDVEMPDMNGIKLLQILGLE-MDLPVIMLSAYSDTKRVMDGVRNG 107 89*********************.***************887778*******************999654.48********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp+ ++el + AUR62042023-RA 108 ACDYLVKPVRIQELQN 123 *************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 554 aa Download sequence |
MASLENERFP KGLRVLVVDD DNTSLKLMDN LLRKCHFHVT TTNQAKEALR ILKANKNKYD 60 IVISDVEMPD MNGIKLLQIL GLEMDLPVIM LSAYSDTKRV MDGVRNGACD YLVKPVRIQE 120 LQNIWQHIVR RKQKAAGGGK CGPGRNASGN RRDGPQEGNE DPATQKKPRL FWSVELHQKF 180 VDAVNQLGLD KAFPKKILDL MNVEGLTREK VASHLQAGGS RLVSVGTEDS LAHIGGGYGV 240 YRSLAGPASY PGYSSLPDHA GGVLGRLNAA TGVASFRGIS SSPLLQTSQF PNSFNAATVR 300 FDPFPFSANQ NASYLLQANP TITTMQMNNR LPLLTPPTPP TSSMMLNTRE FDTQSSSNLG 360 INMSLDSTAK VSWGKPIQPV IHPLSSPQNL LPIPSNNNVS AADITPPNAQ THNDNPLDFL 420 FGTSSMGHPN AQIQDRPSSL NDFNIPAQGQ QVQKPNYFMN LCNISNASSS LIPAVAPTQG 480 ENNNNITAVP SLSQLEDASP QSQQQNDAHK SFDDSTGQNS TESLDDIVGR FLKQGNGEAA 540 AAPDLELDPF LMK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 5e-89 | ARR-B family protein |