PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041705-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 283aa    MW: 31755.5 Da    PI: 6.6432
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041705-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.91.6e-20112161255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a++k++g
  AUR62041705-RA 112 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAALAYDEAALKFKG 161
                     7********.**********94....45************************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MASEDNNENY NKIETNNYDY YQHHHGQGGS HHGVDDGSLV NFPVYSARSQ HDMSAMVQAL  60
SQVISNNNST TPSQAHQDHG AIIPTQIFHA NQPQNINFQP LEANQGDVRK RHYRGVRQRP  120
WGKWAAEIRD PKKAARVWLG TFDTAEAAAL AYDEAALKFK GNKAKLNFPE RVQGKLSDSV  180
ANYPFPNHHQ ATNSYNYMMA SPSFPPHGDN QGSTFAQHPN FHFNSQQYEA TPSYNVSESS  240
ISYGEDHSFA SHPSFSSIKM ETLNPEDLQE HEHMFFSSSS LK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-46ERF family protein