PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041589-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family BBR-BPC
Protein Properties Length: 301aa    MW: 33208 Da    PI: 10.2971
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041589-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind325.21.9e-9912801300
       GAGA_bind   1 mdddgsre.rnkgyyepaaslkenlglqlmssiaerdaki..rernlalsekkaavaerd.........maflqrdkalaernkalverdnklla 83 
                     md dg  + rn+gyy+p   +k +l+lqlms +a+r   +  re+ l +++++a +++rd         +     d  + e   a ++rdnk+++
  AUR62041589-RA   1 MDGDGGLNmRNWGYYDPP--MK-HLNLQLMSNMADRKPLLgsRESAL-IANSNAGFHQRDyvvpnshypV-----DYNMRE---AWIHRDNKFFN 83 
                     899999999*********..77.************999884455555.66777889****9999644444.....555555...66667****** PP

       GAGA_bind  84 lllvenslasalpvgvqvlsgtksids.lqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                     +l++++s        + +  +t  +++ +q+        +++  +ee+++     + ++  + ++  +kkr+ +k++k++k+kk+kk ++ +k+ 
  AUR62041589-RA  84 MLPTSHS--------YAIPTETAPTHHpMQM------LRQPESSNEERTV-----RIEPVCEINNGPMKKRSAGKSEKAPKMKKPKKAPSGPKEG 159
                     ***9997........3333444444430333......3334443344444.....4444555667777889999*************99888776 PP

       GAGA_bind 178 vkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekL 272
                      + ++  +r+k+ kk++++ +ng+++D+s++P+PvCsCtGa++qCY+WG+GGWqSaCCtt++S+yPLP+s+krrgaRiagrKmS gafkk+LekL
  AUR62041589-RA 160 GSGSG--QRAKSAKKTTEVIINGIDMDISSIPIPVCSCTGAPQQCYRWGSGGWQSACCTTSLSTYPLPMSSKRRGARIAGRKMSLGAFKKVLEKL 252
                     66666..89************************************************************************************** PP

       GAGA_bind 273 aaeGydlsnpvDLkdhWAkHGtnkfvti 300
                     aaeGy++ np+DL++hWAkHGtnkfvti
  AUR62041589-RA 253 AAEGYNFTNPIDLRTHWAKHGTNKFVTI 280
                     ***************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDGDGGLNMR NWGYYDPPMK HLNLQLMSNM ADRKPLLGSR ESALIANSNA GFHQRDYVVP  60
NSHYPVDYNM REAWIHRDNK FFNMLPTSHS YAIPTETAPT HHPMQMLRQP ESSNEERTVR  120
IEPVCEINNG PMKKRSAGKS EKAPKMKKPK KAPSGPKEGG SGSGQRAKSA KKTTEVIING  180
IDMDISSIPI PVCSCTGAPQ QCYRWGSGGW QSACCTTSLS TYPLPMSSKR RGARIAGRKM  240
SLGAFKKVLE KLAAEGYNFT NPIDLRTHWA KHGTNKFVTI SIRNSTNVSL PGANLLVTML  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01930.14e-84BBR-BPC family protein