PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041401-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 232aa    MW: 25695.8 Da    PI: 4.2592
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041401-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-182170255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr +k +g+Wv+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  AUR62041401-RA 21 KYKGVRKRK-WGKWVSEIRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRG 70
                    8*****999.**********933...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MVKKSPEYQP NDNSSNVNSI KYKGVRKRKW GKWVSEIRLP NSRERIWLGS YDTAEKAARA  60
FDAAQFCLRG KSANFNFPDN PPEIVGGRSM TPSEIQVAAS RFANNSTNED DRGRLEENPM  120
VEESGEALSY SPSMSDGTTA TTQIDGYTYT SSSFEVAGVE ASFQDQLSLS NALGSGNYVS  180
DFGYLTGFDD FTGGDYFATQ HESNNNFDYA GQVAEETYDA SLYQDSYLWN F*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.18e-58ERF family protein