PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041351-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 761aa    MW: 86162.4 Da    PI: 5.4959
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041351-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3696.2e-1133877581374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+ v+++d + a  +L+++++++sp gd +qRla+y++ +L+arla+++s++yk l++++t+    +++l+a+ l+  ++P+ k+s+
  AUR62041351-RA 387 LRTLLTTCAQSVAADDRRTAYDFLKQIRQHSSPLGDGNQRLAHYVADGLEARLAGTGSQIYKGLTSKRTT---AADVLKAYLLYLAACPFRKLSN 478
                     5789************************************************************999999...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +  N+ I + + +++++HiiDf+i +G+QWp+++q  + R++gpp+++iTg++ p++g   +e++eetg+rL+++A+e++vpfe+++ +akr+++
  AUR62041351-RA 479 FFSNKSIAKRTRKASKIHIIDFGILYGFQWPTFIQRQSMREGGPPRIKITGIDFPQPGfrPAERVEETGRRLENYAQEFKVPFEYRA-IAKRWDT 572
                     *********************************************************9*****************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++le++++++gE+l+Vn++++l++l+de+vs+es r++ Lkl+++l+P+v++    + +++++ F++rf eal ++sa fd+le+ +pre +er+
  AUR62041351-RA 573 IQLEDFDIDEGEVLIVNCIYRLKNLPDETVSVESSRNKALKLIRKLNPDVFINGVVNGSYSAPYFVTRFREALFHFSAQFDMLETIVPREYSERM 667
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      +Er ll+re+ nvvaceg er+er et+++W+ r+ +aGF+++pl++++ + a l ++  + + ++++e+s +l+lgWk+r L+++S W+
  AUR62041351-RA 668 LIERDLLAREALNVVACEGWERVERPETYKQWKIRIIRAGFTQLPLDSEIKERALLQVHSAYHKDFMIDEDSRWLLLGWKGRVLFALSTWQ 758
                     **************************************************************888*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 761 aa     Download sequence    
MDPRVHDYVG LANGIRFQSV NDHGFPVYSN YNYDYVNELP NLGNGLVVHN NYISDVGDVN  60
FSISDTCTRD LSLNSSVTEG NLNEEYDFSD SVLTYINQIL MEEDVEGKGC MLQESLQHQA  120
VQDAEKSLYE VNGKSSLLKR DSHPNPSYFC SNLNNPDSCS YDDSYRCYND GSIDSNSFVI  180
DPSWGYGKGE YCGSDVENGF PVYQLPVSSN SSTSASYDND GGLVDSQINS FGVSGLCTES  240
QSIYQFNKGV EEANKFLPIQ SDFLFSTNMD GLIKNNEEKC NVSLVNPSVN NGDDDIREEC  300
RGRKHAFGDT EERLSKLAAI YDDSKVRSDM FDKVLLHHGG DKNELVVSLR TNLQTAATKK  360
TEQNDESKSG PKGRHKRQGG RKEVVDLRTL LTTCAQSVAA DDRRTAYDFL KQIRQHSSPL  420
GDGNQRLAHY VADGLEARLA GTGSQIYKGL TSKRTTAADV LKAYLLYLAA CPFRKLSNFF  480
SNKSIAKRTR KASKIHIIDF GILYGFQWPT FIQRQSMREG GPPRIKITGI DFPQPGFRPA  540
ERVEETGRRL ENYAQEFKVP FEYRAIAKRW DTIQLEDFDI DEGEVLIVNC IYRLKNLPDE  600
TVSVESSRNK ALKLIRKLNP DVFINGVVNG SYSAPYFVTR FREALFHFSA QFDMLETIVP  660
REYSERMLIE RDLLAREALN VVACEGWERV ERPETYKQWK IRIIRAGFTQ LPLDSEIKER  720
ALLQVHSAYH KDFMIDEDSR WLLLGWKGRV LFALSTWQPT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein