PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041275-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family AP2
Protein Properties Length: 346aa    MW: 38967 Da    PI: 4.217
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041275-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.75.2e-07149955
             AP2  9 dkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++++gr++A+++d  s+n  ++k+ + g ++++ +Aa+ ++ a++k++g
  AUR62041275-RA  1 HRWTGRFEAHLWDkSSWNSlQNKKGRQGAYDSEVDAARTYDLAALKYWG 49
                    789**********77779999988888*****99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
HRWTGRFEAH LWDKSSWNSL QNKKGRQGAY DSEVDAARTY DLAALKYWGP ETTLNFPIEN  60
YTEEVEVMQN ASKEEYLASL RRRSSGFSRG VSKYRGVARF WRMCSCNTCS QEEAAAAYDL  120
AAIEYRGPNA VTNFDISNYI GRVKSLMPKV ESEEPSPKQT EVAVPKFQQQ QIKRQKEEEE  180
LQDEAPLKQQ NLVDAVQREQ DQQMGIPSQL EESKLVNSID HHPAMIGMEG AEDARENPWS  240
FCLDTGGYDP LLVPDIPFDE DGGLLDLFNQ TNFEENIDMM FEGEGNLISL DDTFFDGTDV  300
IGCQTSEELD KKMEIVPKVE ENSLSFSSSS PSSPSSITSL DSCQL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.36e-57AP2 family protein