PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62041079-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family B3
Protein Properties Length: 319aa    MW: 35899.1 Da    PI: 6.3625
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62041079-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B362.38.1e-20119205183
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFk 83 
                     f+k+l +sdv++++r+vlpkk ae+h   ++++e++ +++ d +g  +W++k+++  +++s++yvl+ ++ +Fv a++L++gDf++ +
  AUR62041079-RA 119 FQKQLQNSDVSTLRRMVLPKKAAESHlpHLETKEGIFISMDDMDGmHVWNFKYRFwpNNNSRMYVLE-NTGDFVTAHRLQVGDFIMVY 205
                     99**************************88888999******9998*******9989999999***9.****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MMMMMGERES GRSCQNNEAL GFGTGTGTDS ATNGVGGRTG IVVFNNSNEA NLSTKMPVLG  60
GCFGENKIQR KKRMARQRRS SVSLLPFASS SSTSTTPHVP TSLSLPARVV DPRRLRFLFQ  120
KQLQNSDVST LRRMVLPKKA AESHLPHLET KEGIFISMDD MDGMHVWNFK YRFWPNNNSR  180
MYVLENTGDF VTAHRLQVGD FIMVYQDIIN LNYVIQAKNS SPQEIYNEYT TNTVTDYFQV  240
NNFEINRYNQ LSWNNDPAVN MEDNNNACMS FVYDTTSIAN DSPFDFLGGS TTSYYSRMGG  300
QGFDNFGSVD NLTLDDFY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.18e-82B3 family protein