PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AUR62040982-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
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Family | FAR1 | ||||||||
Protein Properties | Length: 204aa MW: 22972.4 Da PI: 9.5349 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 29.8 | 2e-09 | 48 | 146 | 2 | 86 |
FAR1 2 fYneYAkevGFsvrkskskks...krngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkekdgkwevtkle 82 ++++Y+k+ GF v++s+ + ++ + + t++C + g +++++kk ++k +r++++++C kl k ++ ++w+++k AUR62040982-RA 48 YFRNYGKQEGFGVVRSNGATIgkcSNANDKRDITWTCECFGLPSRKRKKsssifvsyshiSDKVCVKRKSKKVECPVKLYAKVNEVDEWVINKAM 142 89*************998876666666778999*********999999999****99988778888***************************** PP FAR1 83 leHn 86 leH AUR62040982-RA 143 LEHD 146 ***5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MLEKSPTKLL LKESVAISVE IEEYAHVEVS LPPTVGMAYE SGLKIDTYFR NYGKQEGFGV 60 VRSNGATIGK CSNANDKRDI TWTCECFGLP SRKRKKSSSI FVSYSHISDK VCVKRKSKKV 120 ECPVKLYAKV NEVDEWVINK AMLEHDGHNP TPGNSKNITK FRKKFLIENP HIVPQLFNDR 180 MAGVLFGRED MNEIENEKGK SRA* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 92 | 96 | RKRKK |
2 | 92 | 118 | RKRKKSSSIFVSYSHISDKVCVKRKSK |
3 | 93 | 119 | KRKKSSSIFVSYSHISDKVCVKRKSKK |