PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040909-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family ERF
Protein Properties Length: 274aa    MW: 30477.3 Da    PI: 8.468
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040909-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.6e-193382255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +g+WvAeI+  +   ++ r++lg+f+taeeAa+a+++a+  l+g
  AUR62040909-RA 33 KFVGVRQRP-SGKWVAEIKNTT---QKIRIWLGTFDTAEEAARAYDEAACLLRG 82
                    799******.7******99932...36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MEFQFQQLQH KESKLKQTCN KVKSSSKTPT KNKFVGVRQR PSGKWVAEIK NTTQKIRIWL  60
GTFDTAEEAA RAYDEAACLL RGSNTRTNFV NTPTSSNANS ALTRRIRNLV NQKKSLIRNN  120
NQSPPTPPII TSSMKAADNV ANASLVLSQA VSFTGQLLDE NAYRPDVSGQ FDCSWAFPQQ  180
FPPPIPDDDL EMFTKQLTFT TSIEAGGMTS NANEVAMLEF ERMKVERQIS ASLYAMNGVN  240
DYLQSVFNAC NSNDDPATPS WDPPMLYHNF CLG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.18e-37ERF family protein