PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040881-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family C3H
Protein Properties Length: 135aa    MW: 14762.7 Da    PI: 7.0157
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040881-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH35.61.6e-113150726
                    SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  7 rffartGtCkyGdrCkFaHg 26
                    +f+++tG+Ck+G++C+F+H+
  AUR62040881-RA 31 KFYMKTGECKFGEKCRFHHP 50
                    79*****************8 PP

2zf-CCCH42.51e-1379103327
                     S---SGGGGTS--TTTTT-SS-SSS CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaHgp 27 
                      e C+f+++tGtC+yG++CkF H+p
  AUR62040881-RA  79 VEHCPFYMKTGTCSYGANCKFDHPP 103
                     567********************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MWVVRVFKGI ISGGVVAVQV QGVLGLHRGS KFYMKTGECK FGEKCRFHHP IDRSAPTRNQ  60
TLEQNVKFTL AGLPRREGVE HCPFYMKTGT CSYGANCKFD HPPPGEVMAV AGQETSTKAE  120
EEETEDGENV ATAE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12680.11e-36C3H family protein