PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040660-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family GRAS
Protein Properties Length: 467aa    MW: 52280.6 Da    PI: 5.8152
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040660-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS423.41.9e-129954661374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+e+L++cA+a+s++dl    +l+++l++++s +g+p+qRl ay++e+L ar ++s+ ++y+al+++e +   sse l+++++++ev+P++kf++
  AUR62040660-RA  95 LREVLIACAKAISNDDLLTSGWLISELQHMVSVSGEPIQRLGAYILEGLIARYSSSGISIYRALNCKEPT---SSEFLSYMQVLYEVCPYFKFGY 186
                     6899*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea+++e+r+HiiDf+i qG QW++L+qaLa+Rp+gpp++RiTg+++++s+  +   l+ +gerL+ +A+++++pfef++ +    ++
  AUR62040660-RA 187 MSANGAIAEALKNEDRIHIIDFQIAQGSQWISLIQALAARPGGPPRVRITGIDDSTSEfaRGGGLNIVGERLSMLAKACNLPFEFHAAALCCGAE 281
                     ******************************************************99889999*************************6666999* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++L +k++EalaVn+ + lh+++desv  +++rd++L+lvks sPkvv++ve e+++ns++F  rfle+leyysa+f+s++++l+++ +eri
  AUR62040660-RA 282 VKVQNLVLKSEEALAVNFPFLLHHIPDESVGPQNHRDTLLRLVKSWSPKVVTLVEYELNTNSAPFYPRFLETLEYYSAIFESINVTLSKDRKERI 376
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l++eivn++acegaer+erhe  +kWr+r+++aGFkp+pl+  +++++k ll+k++ + y +ee++g+l+lgW++r++v+ +aW+
  AUR62040660-RA 377 NVEQHCLAKEIVNIIACEGAERVERHELHGKWRSRFTMAGFKPYPLNPLVNATIKNLLQKYS-RCYGLEERDGTLYLGWMNRAMVTSCAWQ 466
                     **************************************************************.77*************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    
MQNLRNLQGT YCTFESSLLS GVDNPCGSPS TGSISGNGSA ASLFDPESPS IDSLEIGNLW  60
HHLRELESVM MEPTSDNFYN ENWQQLREMI SRRELREVLI ACAKAISNDD LLTSGWLISE  120
LQHMVSVSGE PIQRLGAYIL EGLIARYSSS GISIYRALNC KEPTSSEFLS YMQVLYEVCP  180
YFKFGYMSAN GAIAEALKNE DRIHIIDFQI AQGSQWISLI QALAARPGGP PRVRITGIDD  240
STSEFARGGG LNIVGERLSM LAKACNLPFE FHAAALCCGA EVKVQNLVLK SEEALAVNFP  300
FLLHHIPDES VGPQNHRDTL LRLVKSWSPK VVTLVEYELN TNSAPFYPRF LETLEYYSAI  360
FESINVTLSK DRKERINVEQ HCLAKEIVNI IACEGAERVE RHELHGKWRS RFTMAGFKPY  420
PLNPLVNATI KNLLQKYSRC YGLEERDGTL YLGWMNRAMV TSCAWQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein