PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AUR62040530-RA
Organism
Chenopodium quinoa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Chenopodioideae; Atripliceae; Chenopodium
Family MYB_related
Protein Properties Length: 296aa    MW: 31822.8 Da    PI: 9.4148
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AUR62040530-RAgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.73.1e-143882147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     r +WT+eE++++++a +++  + Wk+I   +g  +t  q++s+ qky
   AUR62040530-RA 38 RESWTEEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 82
                     789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MNVGGQPNTA NGASSSAGEG PSSSGKKVRK PYTITKSRES WTEEEHDKFL EALQLFDRDW  60
KKIEDFVGSK TVIQIRSHAQ KYFLKVQKNG TAAHVPPPRP KRKAAHPYPQ KAPKNVSVLP  120
QAAIAYSASF NAIAPGYPAW SDGSVLTNPA TSGIMPSDDY NLNIAEADVG RKGFPRISGS  180
SASGIGSSNR SVSNSELPTQ GKSPILHGLP DFAEVYSFIG SVFDPETKGH MGKLKEMDPI  240
NFETVLLLMR NLTLNLSSPD FEPIRNVLSS YDVTTKTVSL DAGNVAKNQP TDVSC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09600.12e-88MYB_related family protein